Gene

edc4

ID

ZDB-GENE-030131-5032

Name

enhancer of mRNA decapping 4

Symbol

edc4 Nomenclature History

Previous Names

fe26b05
si:ch211-237c7.1
wu:fe26b05

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Description

Predicted to be involved in deadenylation-independent decapping of nuclear-transcribed mRNA. Predicted to localize to P-body. Orthologous to human EDC4 (enhancer of mRNA decapping 4).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With edc4 Human Ortholog

No data available

Associated With edc4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR032401	Enhancer of mRNA-decapping protein 4, WD40 repeat region
Domain	IPR049404	Enhancer of mRNA-decapping protein 4, C-terminal
Family	IPR045152	Enhancer of mRNA-decapping protein 4-like
Homologous_superfamily	IPR015943	WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily	IPR036322	WD40-repeat-containing domain superfamily
Homologous_superfamily	IPR044938	Enhancer of mRNA-decapping protein 4, conserved C-terminal domain superfamily
Repeat	IPR001680	WD40 repeat

Domain Details Per Protein

Protein	Length	Enhancer of mRNA-decapping protein 4, conserved C-terminal domain superfamily	Enhancer of mRNA-decapping protein 4, C-terminal	Enhancer of mRNA-decapping protein 4-like	Enhancer of mRNA-decapping protein 4, WD40 repeat region	WD40 repeat	WD40-repeat-containing domain superfamily	WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:A0A8M9PM70 InterPro	1435
UniProtKB:A0A8M9P146 InterPro	1395
UniProtKB:A0A8M3AJJ8 InterPro	1424
UniProtKB:Q1LUT1 InterPro	1384

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	edc4-201 (1) Ensembl	Ensembl	8,162 nt	Select Tool ZFIN BLAST
mRNA	edc4-202 (1) Ensembl	Ensembl	6,287 nt	Select Tool
mRNA	edc4-203 (1) Ensembl	Ensembl	8,129 nt	Select Tool ZFIN BLAST
mRNA	edc4-204 (1) Ensembl	Ensembl	4,053 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations